read grid file path from recipe if provided #205
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Codecov ReportAll modified lines are covered by tests ✅
❗ Your organization needs to install the Codecov GitHub app to enable full functionality. Additional details and impacted files@@ Coverage Diff @@
## main #205 +/- ##
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Coverage 98.52% 98.52%
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Files 16 16
Lines 476 476
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Hits 469 469
Misses 7 7 ☔ View full report in Codecov by Sentry. |
Packing analysis reportAnalysis for packing results located at cellpack/tests/outputs/test_spheres/spheresSST
Packing imageDistance analysisExpected minimum distance: 50.00
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meganrm
approved these changes
Oct 18, 2023
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Problem
For complicated meshes, the grid file takes a long time to create. There is currently no way to reuse grids for the same compartments without renaming the grid file.
Closes #204
Solution
I added a check for
"grid_file_path"in the recipe which loads from the specified grid file if it is present.Type of change
Change summary:
Steps to Verify:
"grid_file_path": PATH_TO_RENAMED_GRID_FILE"load_from_grid_file": truecellPACK should load the grid from the specified path instead of the default
Keyfiles: